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Table 1 Specific real-time PCR primers

From: Inhalation therapy with the synthetic TIP-like peptide AP318 attenuates pulmonary inflammation in a porcine sepsis model

PCR assay

Oligonucleotide sequence (5′-3′)

GenBank no.

IL-1β

S: ACCCTgCAgCTggAggAT

NM_214055

 

A: CCTTTggAgTTTCCCAggA

 

IL-6

S: CCAATCTgggTTCAATCAggA

NM_214399

 

A: gTggTggCTTTgTCTggATTC

 
 

FL: TgTCgAggCTgTgCAgATTAgTACCA(--FL)

 
 

CY5: (L670-)gCACTgATCCAgACCCTgAggCAA(--PH)

 

TNF-α

S: CCCAgAAggAAgAgTTTCCA

NM_214022

 

A: CggCTTTgACATTggCTACA

 
 

FL: ggCCCAAggACTCAgATCATCgTC(--FL)

 
 

CY5: (L670-)CAAACCTCAgATAAgCCCgTCgC(--PH)

 

iNOS

S: gATggCACCATCATAggggAC

NM_001143690

 

A: ggCACCCTgggAACTCAA

 
 

FL: TGGAACACCCCAAATACGAGTGGTTCC(--FL)

 
 

CY5: (L670-)GGAGCTGGAGCTGAAGTGGTACGCCC(--PH)

 

COX-2

S: CCCCTTCTgCCTgACgC

NM_214321

 

A: CTCTgCTCTggTCgATTgAgg

 
 

FL: TCTATCTTACTggAACATggCATCACCCA(--FL)

 
 

CY5: (L670-)TTTgTTgAATCATTTAgCAggCAAATTgCT(--PH)

 

AREG

S: ATTATGCTGCTGGACTGGAC

NM_214376

 

A: TCGCTACCAGAAGGCATTT

 

TNC

S: GAGACCTGACTGCTACAGAG

NM_214230

 

A: CACAACGACTTCCTTGAGTG

 

PPIA

S: CTTTCACAgAATAATTCCAggATT

NM_214353

 

A: ggACAAgATgCCAggACC

 
 

FL. ATgCTTCAggATAAAATTCTCATCATCAAA(--FL)

 
 

CY5: (L670-)TTCTCTCCATAgATggACTTgCCACCA(--PH)

 

sENACg

S: ACTTCACCCCCATCTTCCAC

XM_003357614

 

A: TTCAGGCCAAACTCAGCTC

 
  1. S: sense primer, A: anti-sense primer, FL: fluorescein, CY5: CY5-labelled. IL-1β, Sus scrofa interleukin 1 beta (IL1B), mRNA; IL-6, Sus scrofa interleukin 6 (interferon, beta 2) (IL6), mRNA; TNF-α, Sus scrofa tumor necrosis factor (TNF superfamily, member 2) (TNF), mRNA; iNOS, Sus scrofa nitric oxide synthase 2, inducible (NOS2), mRNA. COX-2, Sus scrofa prostaglandin G/H synthase-2 (PGHS-2), mRNA; AREG, Sus scrofa amphiregulin (AREG), mRNA; TNC, Sus scrofa tenascin C (TNC), mRNA; PPIA, Sus scrofa peptidylprolyl isomerase A (cyclophilin A) (PPIA), mRNA; sENACg, Sus scrofa sodium channel, non-voltage-gated 1, beta subunit (SCNN1B), transcript variant X1, mRNA.