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Table 1 Emerging pathogenic species in CF respiratory microbiome

From: Cystic fibrosis lung environment and Pseudomonas aeruginosa infection

Species

References

Stenotrophomonas maltophilia

Waters et al., 2011 [209]

Methicillin resistant Staphylococcus aureus (MRSA)

Dasenbrook et al., 2008 [210]

Chmiel et al., 2014 [211]

Mycobacterium abscessus

Malouf et al., 1999 [212]

Binder et al., 2013 [213]

Mahenthiralingam et al., 2014 [214]

Achromobacter spp.

Zemanick et al., 2011 [215]

Tunney et al., 2008 [216]

Streptococcus milleri

Sibley et al., 2006 [116]

Sibley et al., 2010 [217]

Rabin et al., 2012 [218]

Aspergillus fumigatus

Sibley et al., 2006 [116]

Stevens et al., 2016 [219]

Speirs et al., 2012 [220]

Nocardia spp.

Heirali et al., 2016 [221]

Nontuberculous mycobacteria (NTM)

Caverly et al., 2016 [222]

Scedosporium apiospermum spp.

Parize et al.,2014 [146]

Rasamsonia argillacea spp.

Mouhajir et al., 2016 [148]

Lomentospora prolificans (Scedosporium prolificans)

Pihet M et al., 2009 [147]

Exophiala dermatitidis

Horré et al.,2010 [223]