Table 4 Pathways enriched in differentially co-expressed genes. p-value comes from using list of 334 genes as background
From: Gene expression analysis in asthma using a targeted multiplex array
Coexpressed in Non-asthmatics | ||||
Cluster # | # Genes in Cluster | # Genes From Cluster in Pathway | Biological Process | p-value |
10 | 25 | 3 | Regulation of Cell-Cell Adhesion Involved in Gastrulation | 2.0 × 10−1 |
13 | Regulation of Multicellular Organismal Development | 2.0 × 10−1 | ||
8 | Regulation of Cell Adhesion | 2.0 × 10−1 | ||
53 | 6 | 4 | Cell Migration | 4.0 × 10−1 |
4 | Locomotion | 5.7 × 10−1 | ||
4 | Localization of Cell | 4.0 × 10−1 | ||
Coexpressed in Asthmatics | ||||
16 | 6 | 3 | Cytoplasmic Pattern Recognition Receptor Signaling Pathway in Response to Virus | 3.0 × 10 −4 |
3 | Positive Regulation of Type 1 Interferon Production | 3.9 × 10 −3 | ||
3 | Negative Regulation of Type 1 Interferon Production | 2.0 × 10 −3 | ||
20 | 6 | 4 | Activation of MAPK Activity | 6.9 × 10−2 |
4 | Peptidyl-Tyrosine Phosphorylation | 7.9 × 10−2 | ||
3 | Eicosanoind Biosynthetic Pathway | 7.9 × 10−2 | ||
11 | 9 | 3 | Odontogenesis | 4.2 × 10−1 |
17 | 7 | 4 | Response to Bacterium | 3.9 × 10−1 |