From: Assessment of viral RNA in idiopathic pulmonary fibrosis using RNA-seq
Genes | Forward nucleotide sequence (5′ → 3′) | Revers nucleotide sequence (5′ → 3′) | |
---|---|---|---|
EBV EBERs | GACTCTGCTTTCTGCCGTCT | AATAGCGGACAAGCCGAATA | |
HERV-K | RT-env-1-Rev | Â | CACCGCACTATTGGCCACA |
Nested-PCR env(1) | AGGGAAAAACCGCCTTAGGG | CACCGCACTATTGGCCACA | |
Nested-PCR env [31] | TGCGGGCAGCAATACTGCT | CGCACTATTGGCCACACATTC | |
Quantitative PCR env | TCACATGGTAAGCGGGATGTC | CGCACTATTGGCCACACATTC | |
Quantitative PCR LTR | AGGGAAAAACCGCCTTAGGG | AGCAGACAAACATGTGAACAAAGG | |
LTR-Fwd |-Rev | CGTGGGAAGGGAAAGACCTGA | AGCAGACAAACATGTGAACAAAGG | |
GAPDH | GAPDH | AGATCATCAGCAATGCCTCCT | AGTCTTCTGGGTGGCAGTG |
HCV | p3804|p305 | GTATCTCGAGGCGACACTCCACCATAGAT | ATACTCGAGGTGCACGGTCTACGAGACCT |
p302|p304 | CCACCATAGATCTCTCCCCTGT | CACTCTCGAGCACCCTATCAGGCAGT | |
Saimiri virus | Human cyclin D1 | CGGAGGAGAACAAACAGATCATCCGCAAAC | GTGTGAGGCGGTAGTAGGACAGGAAGTTGT |
Viral cyclin D1 | ACTGCTTACCTGGATGCATCTGCTCTGTGA | GCAAGTACAGCTTCAGTGTGTCCCATTTCAGTGC | |
HHV-7 | G1|G2 | CATGCACAACGCAAGCTCTACTA | ACGTAGTTTCGTGCAGTTGTATCGT |
G3|G4 | GCTTGTTAGAATACACAAGATGTACA | CTGTCTAATAATGTCTATGTCTCTCCA |