From: Analysis of GWAS-nominated loci for lung cancer and COPD revealed a new asthma locus
CHR | SNPa | HGVS name | Genotyped or imputed | MAF SLSJ/UCSCb | Nearest gene | r2c | SLSJ cohort | CanCOLD | Combined (SLSJ, CanCOLD) | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Effect allele | P | Effect allele | P | Z-score | P | |||||||
2 | rs13382914 | g.15969655C>T | Imputed | 0.23/0.42 | 111,028 bp before MYCN | 0.995 | T | 0.011 | T | 0.001 | 4.014 | 5.98E−05 |
rs56003245 | g.15970221T>A | Imputed | 0.23/0.43 | 110,462 bp before MYCN | 0.995 | A | 0.018 | A | 0.001 | 3.990 | 6.62E−05 | |
rs61557349 | g.15970339A>G | Imputed | 0.23/0.42 | 110,344 bp before MYCN | 0.995 | G | 0.018 | G | 0.001 | − 3.990 | 6.62E−05 | |
rs4668471 | g.15977866A>T | Imputed | 0.23/0.53 | 102,817 bp before MYCN | 1.000 | T | 0.009 | T | 0.001 | − 4.056 | 4.99E−05 |