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Table 1 Gene and single nucleotide polymorphisms (SNPs)

From: Genetic polymorphisms and risk of recurrent wheezing in pediatric age

Gene dbSNP HGVS description Functional consequence Position (bp) Chr Gene location
ADRB2 Rs1042713 NC_000005.9:g.148206440G > A Mis-sense 148206440 5 Exon
CCL5 Rs2280788 NC_000017.10:g.34207405G > C Upstream variant 2 KB 34207405 17 Intergenic
CHUK Rs3808916 NC_000010.10:g.101947737C > T Downstream variant 101947737 10 Intergenic
CTLA4 Rs3087243 NC_000002.11:g.204738919G > A Downstream variant 204738919 2 Intergenic
CXCL9 Rs2276886 NC_000004.11:g.76928428C > T Intron variant 76928428 4 Intron
JUN Rs11688 NC_000001.10:g.59247993C > T Transition substitution 59247993 1 Exon
IKIKB Rs3747811 NC_000008.10:g.42129505A > T Intron variant 42129505 8 Intron
  Rs10958713 NC_000008.10:g.42180716C > T Intron variant 42180716 8 Intron
IL1RL1 Rs1921622 NC_000002.11:g.102966067G > A Intron variant 102966067 2 Intron
IL1R2 Rs740044 NC_000002.11:g.102600169A > C Transversion substitution 102600169 2 Exon
IL4R Rs1805010 NC_000016.9:g.27356203A > G Mis-sense 27356203 16 Exon
  Rs1805015 NC_000016.9:g.27374180 T > C Mis-sense 27374180 16 Exon
  Rs1801275 NC_000016.9:g.27374400A > G Mis-sense 27374400 16 Exon
IL7 Rs2583762 NC_000008.10:g.79697483A > T Intron variant 79697483 8 Intron
IL8 Rs4073 NC_000004.11:g.74606024A > T Upstream variant 2 KB 74606024 4 Intergenic
IL10 Rs1800872 NC_000001.10:g.206946407 T > G Upstream variant 2 KB 206946407 1 Intergenic
  Rs1800896 NC_000001.10:g.206946897 T > C Upstream variant 2 KB 206946897 1 Intergenic
IL13 Rs20541 NC_000005.9:g.131995964A > G Mis-sense 131995964 5 Exon
  Rs1800925 NC_000005.9:g.131992809C > T Upstream variant 2 KB 131992809 5 Intergenic
IL18 Rs187238 NC_000011.9:g.112034988C > G Upstream variant 2 KB 112034988 11 Intragenic
IL18RAP Rs917998 NC_000002.11:g.103068156C > T Intron variant 103068156 2 Intron
Il19 Rs2243188 NC_000001.10:g.207014472A > C Intron variant 207014472 1 Intron
  Rs2243191 NC_000001.10:g.207015957 T > C Mis-sense 207015957 1 Exon
IL20 Rs2981573 NC_000001.10:g.207040577G > A Intron variant 207040577 1 Intron
LBP Rs12624843 NC_000020.10:g.36989096G > A Intron variant 36989096 20 Intron
MBL2 Rs1800450 NC_000010.10:g.54531235C > T Mis-sense 54531235 10 Exon
  Rs1800451 NC_000010.10:g.54531226C > T Mis-sense 54531226 10 Exon
  Rs5030737 NC_000010.10:g.54531242G > A Mis-sense 54531242 10 Exon
MAP3K1 Rs702680 NC_000005.9:g.56220382 T > C Intron variant 56220382 5 Intron
  Rs889312 NC_000005.9:g.56031884C > A Upstream variant 56031884 5 Intergenic
NFKB1A Rs2233419 NC_000014.8:g.35871960G > A Intron variant 35871960 14 Intron
  Rs3138052 NC_000014.8:g.35875021 T > C Upstream variant 2 KB 35875021 14 Intergenic
NFKB1B Rs3136641 NC_000019.9:g.39396649C > T Intron variant 39396649 19 Intron
NGF Rs11102930 NC_000001.10:g.115881055G > A Upstream variant 2 KB 115881055 1 Intergenic
RAD50 Rs2706347 NC_000005.9:g.131905117G > T Intron variant 131905117 5 Intron
SPATS2L Rs295137 NC_000002.11:g.201150040C > T Upstream variant 201150040 2 Intergenic
TBXA2R Rs4523 NC_000019.9:g.3595794A > G Synonymous codon 3595794 19 Exon
TLR1 Rs4543123 NC_000004.11:g.38792524A > G Downstream variant 38792524 4 Intergenic
TLR3 Rs1519309 NC_000004.11:g.187015089C > T Downstream variant 187015089 4 Intergenic
  Rs3775291 NC_000004.11:g.187004074C > T Mis-sense 187004074 4 Exon
TLR4 Rs2737190 NC_000009.11:g.120464181G > A Upstream variant 120464181 9 Intergenic
  Rs4986790 NC_000009.11:g.120475302A > G Mis-sense 120475302 9 Exon
  Rs4986791 NC_000009.11:g.120475602C > T Mis-sense 120475602 9 Exon
TLR5 Rs2241096 NC_000001.10:g.223310048G > A Intron variant 223310048 5 Intron
TNFRSF1B Rs1061622 NC_000001.10:g.12252955 T > G Mis-sense 12252955 1 Exon
VEGFA Rs833058 NC_000006.11:g.43731854C > T Upstream variant 43731854 6 Intergenic
  Rs2146323 NC_000006.11:g.43745095C > A Intron variant 43745095 6 Intron
  1. Chr chromosome, HGVS Human Genome Variation Society - Genome Build 37.1 (http://www.ncbi.nlm.nih.gov); the position reflects the distance from short-arm telomere. Bp base pairs.