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Table 2 List of 118 IPF prognostic predictor genes within the red, black and turquoise gene modules

From: A functional genomic model for predicting prognosis in idiopathic pulmonary fibrosis

Gene FC Gene FC Gene FC Gene FC
IL1R2¥ 2.0 PPWD1 −1.7 ASF1A −1.6 ABCD2 −1.5
ERAF§ 2.0 CETN3 −1.6 LMO7 −1.6 GZMK −1.5
CEACAM8¥ 1.8 SH2D1A −1.6 GCET2 −1.6 TRIM52 −1.5
ARG1¥ 1.6 SLC39A10 −1.6 PAQR8 −1.6 C8orf15 −1.5
FOXO3§ 1.5 SHPRH −1.6 BIRC3 −1.6 ITK −1.5
TNS1§ 1.5 WDR75 −1.6 CAMK4 −1.6 ICOS −1.5
CYP4F2¥ 1.5 C14orf64 −1.6 ZC3H6 −1.6 FHIT −1.5
CYP4F3¥ 1.5 KPNA5 −1.6 CD28 −1.6 TSEPA −1.5
ARHGAP5 −1.8 NOP58 −1.6 GTPBp0 −1.6 NPCDR1 −1.5
ORC3L −1.8 PARp5 −1.6 C5orf51 −1.6 OXNAD1 −1.5
ZNF100 −1.8 PRO0471 −1.6 TRBC1 −1.6 IL7R −1.5
UTp5 −1.8 RCAN3 −1.6 CAMK2D −1.5 HLA-DQA1 −1.5
ANKRD36B −1.8 C7orf64 −1.6 PPM1K −1.5 TMEM156 −1.5
LOC399753 −1.8 ANKRD36 −1.6 CCDC76 −1.5 HLA-DQA1 −1.5
KCNA3 −1.8 GPR174 −1.6 CASD1 −1.5 LOC401397 −1.5
RHOH −1.8 NDUFAF4 −1.6 pRY10 −1.5 CDK6 −1.5
LCK −1.8 CCDC141 −1.6 DPP4 −1.5 GCNT4 −1.5
C16orf52 −1.7 GPR18 −1.6 S1PR1 −1.5 NELL2 −1.5
TC2N −1.7 DDX60 −1.6 ITGA6 −1.5 FLJ33630 −1.5
HIVEp −1.7 TMEM209 −1.6 GBP4 −1.5 TRAT1 −1.5
KIF3A −1.7 GVIN1 −1.6 ABCE1 −1.5 LEF1 −1.5
IFT80 −1.7 TMEM161B −1.6 TXK −1.5 FCRL3 −1.5
TIA1 −1.7 USP53 −1.6 TRAF5 −1.5 GUSBL2 −1.5
ZNF83 −1.7 TRAJ17 −1.6 SLAMF6 −1.5 SEPSECS −1.5
SETDB2 −1.7 MRPL1 −1.6 CD96 −1.5 BTLA −1.5
WDR36 −1.7 SNORD116 −1.6 PRKACB −1.5   
ZNF141 −1.7 GPR171 −1.6 ALG10B −1.5   
TRBC1 −1.7 MGC40069 −1.6 NBPF10 −1.5   
FAM69A −1.7 LOC439949 −1.6 MGAT4A −1.5   
C1GALT1 −1.7 CCR7 −1.6 INPP4B −1.5   
GIMAP5 −1.7 NUP43 −1.6 STAT4 −1.5   
  1. FC = Fold change; ¥denotes genes in red module; §denotes genes in black module; the rest of genes are in turquoise module