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Table 2 Microbiological Outcome Criteria

From: Successful management of concurrent COVID-19 and Pneumocystis Jirovecii Pneumonia in kidney transplant recipients: a case series

Pathogens

Case 1

Case 2

Case 3

Case 4

SARS-CoV-2 RNA

Positive

Positive

Positive

Positive

mNGS Sample

BALF

Blood

Blood

-

Pneumocystis jirevocii DNA

Positive

Positive

Positive

-

Human betaherpesvirus 5 DNA

Positive

Positive

Negative

-

Human alphaherpesvirus 1 DNA

Positive

Negative

Positive

-

Human gammaherpesvirus 4 DNA

Positive

Negative

Negative

-

Human polyomavirus 1 DNA

Negative

Positive

Negative

-

Aspergillus DNA

Positive

Negative

Negative

-

  1. mNGS, metagenomic next-generation sequencing; BALF, Bronchoalveolar lavage fluid