miR-125b-5p expression is upregulated in A549/DDP cells
A GEO dataset (GSE168707) was analyzed to assess miR-125b-5p’s involvement in DDP resistance in NSCLC. Levels of miR-125b-5p were remarkably higher in DDP-resistant patients relative to those who were DDP-sensitive (Fig. 1A–C). miR-125b-5p levels were higher in A549/DDP cells relative to A549 cells (Fig. 1D). The levels of miR-125b-5p were remarkably high in A549/DDP cells. In NSCLC cells, high miR-125b-5p levels were associated with DDP resistance, demonstrating that miR-125b-5p could be a potential treatment target to overcome DDP resistance.
In NSCLC, miR-125b-5p reduces the sensitivity to DDP, leading to DDP resistance
We knocked down or overexpressed miR-125b-5p to investigate whether changes in its levels in A549 cells affected cell sensitivity to DDP. Subsequently, the viability of A549 cells upon treatment was assessed by the CCK-8 assay for various doses of DDP (0, 6.25 μg/mL). The findings suggested that in the miR-125b-5p mimic group, the cell viability of A549 following stimulation by DDP was substantially elevated in contrast with the control mimic group (Fig. 2A). On the contrary, in the miR-125b-5p inhibitor group, the cell viability was considerably attenuated (Fig. 2A) as opposed to the control inhibitor group. Additionally, A549 cell apoptosis was detected upon stimulation with indicated DDP concentrations. The apoptosis rate in A549 cells in the miR-125b-5p mimic group reduced significantly relative to the control, whereas a significantly attenuated apoptosis was observed upon miR-125b-5p inhibitor treatment in A549 cells (Fig. 2B, C). Thus, miR-125b-5p reduced the sensitivity of A549 cells to DDP.
Next, miR-125b-5p was knocked down or overexpressed in A549/DDP cells to confirm whether, in NSCLC, a change in DDP sensitivity induced by miR-125b-5p led to DDP resistance. A CCK-8 assay was conducted to test the viability of A549 cells. These findings indicated that in the miR-125b-5p mimic group, A549 cellular viability was substantially elevated in contrast with the control mimic group (Fig. 2D). On the contrary, the cell viability upon treatment with the miR-125b-5p inhibitor was attenuated substantially (Fig. 2D) in comparison with the control inhibitor group. The results suggested that the rate of apoptosis of A549 cells in the miR-125b-5p mimic group reduced remarkably in comparison with the control (Fig. 2E, F), while that of A549 cells in the miR-125b-5p inhibitor group was enhanced significantly (Fig. 2E, F). Thus, miR-125b-5p attenuated A549 cells’ sensitivity to DDP, which induced DDP resistance in NSCLC cells.
Prediction and demonstration of CREB1 as the direct target of miR-125b-5p
To identify the possible binding target genes of miR-125b-5p, three computer applications (Targetscan V8.0 https://www.targetscan.org/vert_80/, starBase V2.0 https://starbase.sysu.edu.cn/starbase2/, and Pictar https://pictar.mdc-berlin.de/) were used [19]. Among these candidate genes, CREB1 was consistently predicted by all three applications. Figure 3A shows the possible arrangement of miR-125b-5p binding to CREB1. The binding energy of miR-125b-5p to CREB1 3'UTR was − 21.8 kcal/mol, indicating a feasible interaction between them. As illustrated in Fig. 3B, the dual-luciferase reporter assay confirmed a direct binding between miR-125b-5p and CREB1 3′UTR.
To demonstrate that miR-125b-5p mediated the expression of CREB1, we regulated the expression of miR-125b-5p in A549 cells. Upon miR-125b-5p upregulation (Fig. 3C), the expression of CREB1 protein was downregulated (Fig. 3D, E). Conversely, upon miR-125b-5p inhibition (Fig. 3C), CREB1 protein was upregulated (Fig. 3D, E). However, miR-125b-5p overexpression and suppression did not impact the mRNA expression of CREB1 (Fig. 3F). These results showed that CREB1 was indeed the directly targeted gene by miR-125b-5p and its expression was affected by miR-125b-5p post-transcriptionally.
To verify that miR-125b-5p modulated CREB1 expression, a rescue experiment was performed. Next, the protein levels of CREB1 were assessed by western blotting. As shown in Fig. 3G, H, overexpression of miR-125b-5p restored the effects of CREB1 upregulation. Thus, miR-125b-5p negatively elevated CREB1 levels post-transcriptionally.
miR-125b-5p induces resistance to DDP by downregulating CREB1 expression in NSCLC cells
A recent study demonstrates that a decrease in the phosphorylation level of CREB1 causes DDP resistance in LC cells [17]. To investigate whether CREB1 levels were reduced in DDP-resistant NSCLC cells, we first determined CREB1 expression between A549 and A549/DDP via western blot analysis. CREB1 protein levels were low in A549/DDP as compared to A549 (Additional file 1: Fig. 1A, B). Further, we knocked down or overexpressed CREB1 in A549/DDP cells. Western blotting indicated that knocking down or overexpressing CREB1 in A549/DDP cells caused suppression (Additional file 1: Fig. 1C, D) or elevation (Additional file 1: Fig. 1E, F) in CREB1 protein levels, respectively. The findings of the CCK8 assay showed that A549/DDP cell viability in the Si-CREB1 group was substantially elevated relative to the Si-Control group (Additional file 1: Fig. 1G); On contrary, cell viability in the CREB1 overexpression group was considerably attenuated (Additional file 1: Fig. 1G) as opposed to the Control group. Additionally, we detected apoptosis in A549/DDP. The apoptosis rate in A549/DDP cells in the CREB1 knockout group reduced substantially relative to that in the control group (Additional file 1: Fig. 1H, I), while it was enhanced in the CREB1 vector group (Additional file 1: Fig. 1H, I). Therefore, in NSCLC cells, CREB1 could inhibit the resistance of DDP.
To prove that miR-125b-5p negatively regulated CREB1 expression, four different groups were transfected in A549/DDP and A549 cells as follows: a. Control vector + Control mimic; b. CREB1 vector + Control mimic; c. Control vector + miR-125b-5p mimic, and d. CREB1 vector + miR-125b-5p mimic. As shown in Fig. 4A–G, the cellular viability in the miR-125b-5p mimic + CREB1 vector group was between those in the CREB1 vector and miR-125b-5p mimic groups (Fig. 4A) following stimulation by DDP. miR-125b-5p overexpression could reverse the effects of CREB1, thereby confirming that miR-125b-5p reduced DDP sensitivity in A549 cells via the mechanism of targeting CREB1. Additionally, apoptosis assays also confirmed the above result (Fig. 4B, C). Next, the protein levels of CREB1 were assessed by western blotting. As shown in Fig. 4D, overexpression of miR-125b-5p restored the effects of CREB1 upregulation in A549/DDP cells. Then the viability of A549/DDP cells transfected with the miR-125b-5p mimic + CREB1 vector was between to that in the CREB1 vector and miR-125b-5p mimic group (Fig. 4E). Additionally, apoptosis assays showed that miR-125b-5p indeed induced A549/DDP cells’ resistance to DDP by targeting CREB1 (Fig. 4F, G). miR-125b-5p overexpression could thus reverse CREB1’s effects, thereby proving that miR-125b-5p induced cells’ resistance to DDP by targeting CREB1. The above results demonstrated in NSCLC cells that miR-125b-5p induced resistance to DDP by downregulating CREB1.
miR-125b-5p induces in vivo DDP resistance by targeting CREB1
We subcutaneously injected A549 cells carrying a lentiviral vector overexpressing miR-125b-5p or a corresponding control vector (1 × 105 cells/200 μl per mouse) into the armpit of nude mice to construct a nude mouse xenograft model for verifying the in vivo impact of miR-125b-5p on the sensitivity to DDP. Three weeks later, the nude mice were treated with DDP (concentration 5 mg/kg per mouse for two weeks) by injection into the tail vein. The nude mice injected A549 cells carrying an empty lentiviral vector were as the control group. The mice were euthanized and the xenograft was recovered. The tumor size and growth rate in the miR-125b-5p overexpression group were remarkably greater in contrast with the control (Fig. 5A, B). The miR-125b-5p overexpression group showed a considerable elevation in the expression of this gene (Fig. 5C), while CREB1 expression was substantially attenuated (Fig. 5D, E). The results of Ki-67 immunohistochemistry showed that tumor cell proliferation increased remarkably in the miR-125b-5p overexpression group as opposed to the control (Fig. 5F). H&E staining indicated that mitosis in tumor cells was substantially attenuated (Fig. 5F) upon overexpression of miR-125b-5p. Overall, our data indicated that miR-125b-5p was critical in the formation and development of DDP resistance in NSCLC.
TRIM28 levels increase in A549/DDP cells, further inducing the expression of miR-125b-5p
We predicted the transcription factors regulating miR-125b-5p’s transcription using Genecard to clarify the mechanism of upstream regulation (Fig. 6A). A total of 8 predicted transcription factors were tested using qRT-PCR analysis. TRIM28 showed the highest expression in A549/DDP cells (Fig. 6B) in comparison with A549 cells. Thus, we speculated that TRIM28 may be involved in the transcriptional regulation of miR-125b-5p. Subsequently, we knocked down or overexpressed TRIM28 in A549/DDP cells, and western blotting indicated suppression (Fig. 6C, D) or elevation (Fig. 6E, F) in TRIM28 levels, respectively. And when TRIM28 was upregulated, CREB1 was downregulated in A549/DDP cells. Conversely, when TRIM28 was downregulated, CREB1 was upregulated in A549/DDP cells. After that, qRT-PCR analysis was performed to assess the expression of miR-125b-5p in each group. Overexpression of TRIM28 significantly elevated miR-125b-5p levels. However, inhibition of TRIM28 reduced miR-125b-5p levels (Fig. 6G). Thus, TRIM28 could induce miR-125b-5p expression and then affect the expression of CREB1.
TRIM28 induces DDP resistance in NSCLC by upregulating miR-125b-5p expression
To investigate whether TRIM28 impacted DDP resistance in NSCLC, we knocked down or overexpressed TRIM28 in A549/DDP cells. Subsequently, we analyzed the viability of these cells treated with DDP by CCK-8 assay. The findings demonstrated that the viability of the A549/DDP cells in the TRIM28 overexpression group stimulated via DDP was substantially elevated as compared to the control vector group (Fig. 7A). On the contrary, the cell viability in the TRIM28 siRNA group was considerably attenuated (Fig. 7A) relative to the control siRNA group. Additionally, we detected apoptosis in A549/DDP cells following stimulation with DDP. The rate of apoptosis in A549/DDP cells in the TRIM28 overexpression group was reduced as opposed to the control group (Fig. 7B, C), while it was increased significantly in the TRIM28 siRNA group (Fig. 7B, C). Collectively, these findings suggested that TRIM28 induced resistance to DDP in A549/DDP cells. Thus, TRIM28 influenced DDP resistance in NSCLC.
Four different groups of A549 and A549/DDP cells were transfected as follows: a. Control siRNA + Control mimic; b. TRIM28 siRNA + Control mimic; c. Control siRNA + miR-125b-5p mimic, and d. TRIM28 siRNA + miR-125b-5p mimic, to confirm whether TRIM28 induced DDP resistance in NSCLC by elevating miR-125b-5p levels (Fig. 7D–F). The cell viability in the group transfected with the TRIM28 siRNA + miR-125b-5p mimic was between that in the TRIM28 siRNA and miR-125b-5p mimic group (Fig. 7D) stimulated with DDP. Thus, the inhibition of TRIM28 expression reversed miR-125b-5p’s effects, thereby proving that, in NSCLC, TRIM28 induced DDP resistance by upregulating the expression of miR-125b-5p. Additionally, apoptosis assays also confirmed the above finding (Fig. 7E, F).